Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
bioconductor.org "MathematicalBiology" keyword
ISoLDE 1.30.0
Integrative Statistics of alleLe Dependent Expression3 versions - Latest release: 6 months ago - 9.18 thousand downloads total - 1 maintainer
sRACIPE 1.18.0
Systems biology tool to simulate gene regulatory circuits3 versions - Latest release: 6 months ago - 5.77 thousand downloads total - 0 stars on GitHub - 1 maintainer
AlphaBeta 1.16.0
Computational inference of epimutation rates and spectra from high-throughput DNA methylation dat...3 versions - Latest release: 6 months ago - 7.43 thousand downloads total - 1 maintainer
CancerInSilico 2.22.0
An R interface for computational modeling of tumor progression3 versions - Latest release: 6 months ago - 8.93 thousand downloads total - 2 maintainers
missRows 1.22.0
Handling Missing Individuals in Multi-Omics Data Integration3 versions - Latest release: 6 months ago - 6.95 thousand downloads total - 1 maintainer
IgGeneUsage 1.18.0
Differential gene usage in immune repertoires3 versions - Latest release: 8 days ago - 4.83 thousand downloads total - 6 stars on GitHub - 1 maintainer
seqArchR 1.8.0
Identify Different Architectures of Sequence Elements3 versions - Latest release: 16 days ago - 1 dependent package - 2.62 thousand downloads total - 1 stars on GitHub - 1 maintainer
GenomAutomorphism 1.6.0
Compute the automorphisms between DNA's Abelian group representations3 versions - Latest release: 17 days ago - 1.4 thousand downloads total - 0 stars on GitHub - 1 maintainer
RandomWalkRestartMH 1.22.0
Random walk with restart on multiplex and heterogeneous Networks2 versions - Latest release: 6 months ago - 1 dependent package - 9.31 thousand downloads total - 17 stars on GitHub - 1 maintainer
MouseFM 1.12.0
In-silico methods for genetic finemapping in inbred mice2 versions - Latest release: 6 months ago - 4.98 thousand downloads total - 0 stars on GitHub - 1 maintainer
GeneAccord 1.18.0 removed
Detection of clonally exclusive gene or pathway pairs in a cohort of cancer patients1 version - Latest release: 7 months ago - 4.41 thousand downloads total - 2 stars on GitHub - 1 maintainer
Related Keywords
Software
11
Genetics
6
SystemsBiology
6
BiomedicalInformatics
5
FunctionalGenomics
4
GeneExpression
3
GeneRegulation
3
ImmunoOncology
3
Pathways
2
SomaticMutation
2
GenePrediction
2
DimensionReduction
2
GenomicVariation
2
PatternLogic
2
r
2
FeatureExtraction
2
Epigenetics
2
GeneTarget
2
GeneticVariability
2
MultipleComparison
2
SNP
2
RNASeq
2
mutual
1
Network
1
Regression
1
KEGG
1
GraphAndNetwork
1
BioCarta
1
genome-algebra
1
genome
1
promoter-sequence-architectures
1
r-package
1
genetic-code-algebra
1
genetic-code
1
WholeGenome
1
MultipleSequenceAlignment
1
ComparativeGenomics
1
unsupervised-machine-learning
1
sequence-architectures
1
scikit-learn
1
sequence-analysis
1
exclusivity
1
cooccurrence
1
clonal
1
cancer
1
qtl-mapping
1
qtl
1
mouse
1
inbred-strains
1
inbred-mice
1
gene-candidates
1
finemap
1
VariantAnnotation
1
systems-biology
1
networks
1
multiplex-networks
1
computational-biology
1
complex-systems
1
bioinformatics
1
Reactome
1
NetworkInference
1
DifferentialExpression
1
Bayesian
1
Visualization
1
StatisticalMethod
1
PrincipalComponent
1
SingleCell
1
CellBiology
1
stochastic
1
sracipe
1
simulation
1
simulated-annealing
1
regulatory-networks
1
racipe
1
genetics
1
gene-circuit-explorer
1
gene
1
cpp
1
ResearchField
1
Transcription
1
Sequencing
1
GeneSetEnrichment
1
nonnegative-matrix-factorization
1
nmf
1
clustering
1
Transcriptomics
1
MotifDiscovery
1
DNASeq
1
Clustering
1
vdj-recombination
1
tcr-repertoire
1
immunology
1
immunological-bioinformatics
1
immunoinformatics
1
immunoglobulin
1
immunogenomics
1
immune-repertoires
1
immune-repertoire-analysis
1
immune-repertoire
1
high-throughput-sequencing
1