bioconductor.org "chip-seq" keyword
MotifPeeker 1.2.0
Benchmarking Epigenomic Profiling Methods Using Motif Enrichment2 versions - Latest release: 3 months ago - 2.95 thousand downloads total - 2 stars on GitHub - 1 maintainer
similaRpeak 1.42.0
Metrics to estimate a level of similarity between two ChIP-Seq profiles6 versions - Latest release: 4 months ago - 1 dependent package - 21.7 thousand downloads total - 7 stars on GitHub - 1 maintainer
rmspc 1.16.0
Multiple Sample Peak Calling6 versions - Latest release: 4 months ago - 7.83 thousand downloads total - 20 stars on GitHub - 1 maintainer
geneXtendeR 1.36.0
Optimized Functional Annotation Of ChIP-seq Data6 versions - Latest release: 3 months ago - 20.7 thousand downloads total - 9 stars on GitHub - 1 maintainer
chromswitch 1.22.0 removed
An R package to detect chromatin state switches from epigenomic data1 version - Latest release: over 2 years ago - 7.34 thousand downloads total - 4 stars on GitHub - 1 maintainer
sevenC 1.30.0
Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs6 versions - Latest release: 4 months ago - 14.6 thousand downloads total - 13 stars on GitHub - 1 maintainer
target 1.24.0
Predict Combined Function of Transcription Factors6 versions - Latest release: 3 months ago - 11.2 thousand downloads total - 5 stars on GitHub - 1 maintainer
Related Keywords
Software
7
ChIPSeq
5
bioconductor
4
DataImport
3
Epigenetics
3
FunctionalGenomics
3
Genetics
3
MultipleComparison
3
r
3
r-package
3
ChipOnChip
2
Annotation
2
Coverage
2
DifferentialPeakCalling
2
transcription-factors
2
epigenomics
2
bioconductor-package
2
HistoneModification
2
bioinformatics
2
Transcription
2
GeneExpression
1
ImmunoOncology
1
Clustering
1
functional-annotation
1
epigenetics
1
computational-biology
1
c
1
Visualization
1
ChIPchip
1
Classification
1
DNA3DStructure
1
HiC
1
Regression
1
3d-genome
1
chromatin-interaction
1
hi-c
1
prediction
1
sequence-motif
1
StatisticalMethod
1
algorithm
1
dna-binding
1
gene-regulation
1
Alignment
1
MotifDiscovery
1
QualityControl
1
SequenceMatching
1
interactive-report
1
motif-enrichment-analysis
1
BiologicalQuestion
1
DifferentialExpression
1
chip-profiles
1
metrics
1
RNASeq
1
Sequencing
1
analysis
1
enriched-regions
1
genome-analysis
1
mspc
1
next-generation-sequencing
1
ngs-analysis
1
overlapping-peaks
1
peak
1
peaks
1
GO
1
GenomeAnnotation
1
NaturalLanguageProcessing
1
PeakDetection
1