bioconductor.org "chip-seq" keyword
geneXtendeR 1.37.0
R/Bioconductor package for optimized functional annotation of ChIP-seq data7 versions - Latest release: 5 months ago - 33.1 thousand downloads total - 10 stars on GitHub - 1 maintainer
MotifPeeker 1.4.0
Benchmarking Epigenomic Profiling Methods Using Motif Enrichment3 versions - Latest release: 5 months ago - 6.29 thousand downloads total - 3 stars on GitHub - 1 maintainer
rmspc 1.18.0
Multiple Sample Peak Calling7 versions - Latest release: 3 months ago - 13.3 thousand downloads total - 22 stars on GitHub - 1 maintainer
sevenC 1.32.0
Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs7 versions - Latest release: 5 months ago - 22 thousand downloads total - 13 stars on GitHub - 1 maintainer
epiRomics 1.0.0
Epigenomic Analysis Package Built for R (epiRomics)1 version - Latest release: 5 months ago - 3.01 thousand downloads total - 6 stars on GitHub - 1 maintainer
target 1.26.0
Predict Combined Function of Transcription Factors7 versions - Latest release: 4 months ago - 17.2 thousand downloads total - 5 stars on GitHub - 1 maintainer
similaRpeak 1.44.0
Metrics to estimate a level of similarity between two ChIP-Seq profiles7 versions - Latest release: 5 months ago - 1 dependent package - 29 thousand downloads total - 7 stars on GitHub - 1 maintainer
chromswitch 1.22.0 removed
An R package to detect chromatin state switches from epigenomic data1 version - Latest release: almost 3 years ago - 7.34 thousand downloads total - 5 stars on GitHub - 1 maintainer
Related Keywords
Software
8
ChIPSeq
5
bioconductor
4
FunctionalGenomics
4
Epigenetics
4
r-package
4
Transcription
3
transcription-factors
3
MultipleComparison
3
epigenomics
3
r
3
bioinformatics
2
HistoneModification
2
RNASeq
2
Sequencing
2
bioconductor-package
2
Genetics
2
DataImport
2
epigenetics
2
ChIPchip
1
Classification
1
Coverage
1
DNA3DStructure
1
HiC
1
Annotation
1
peaks
1
peak
1
overlapping-peaks
1
ngs-analysis
1
next-generation-sequencing
1
mspc
1
genome-analysis
1
enriched-regions
1
Regression
1
3d-genome
1
chromatin-interaction
1
hi-c
1
prediction
1
sequence-motif
1
c
1
computational-biology
1
functional-annotation
1
Alignment
1
MotifDiscovery
1
QualityControl
1
SequenceMatching
1
interactive-report
1
motif-enrichment-analysis
1
BiologicalQuestion
1
DifferentialExpression
1
chip-profiles
1
metrics
1
Clustering
1
DifferentialPeakCalling
1
GeneExpression
1
ImmunoOncology
1
StatisticalMethod
1
algorithm
1
dna-binding
1
gene-regulation
1
ATACSeq
1
GeneRegulation
1
Visualization
1
atac-seq
1
chromatin-accessibiity
1
data-visualization
1
enhancer
1
enhancer-prediction
1
histone
1
multi-omics
1
regulatory-network
1
regulome-analysis
1
rna-seq
1
transcription-factor-binding
1
ucsc-browser
1
ChipOnChip
1
analysis
1