bioconductor.org "bioconductor" keyword
NormalyzerDE 1.30.0
Evaluation of normalization methods and calculation of differential expression analysis statistics7 versions - Latest release: 4 months ago - 38.7 thousand downloads total - 26 stars on GitHub - 1 maintainer
scPCA 1.26.0
Sparse Contrastive Principal Component Analysis7 versions - Latest release: 5 months ago - 25.9 thousand downloads total - 12 stars on GitHub - 1 maintainer
Top 1.7% on bioconductor.org
13 versions - Latest release: 13 days ago - 69 dependent packages - 3.67 million downloads total - 74 stars on GitHub - 1 maintainer
rhdf5 2.56.1
R Interface to HDF513 versions - Latest release: 13 days ago - 69 dependent packages - 3.67 million downloads total - 74 stars on GitHub - 1 maintainer
Top 1.4% on bioconductor.org
7 versions - Latest release: 5 months ago - 47 dependent packages - 2.61 million downloads total - 118 stars on GitHub - 1 maintainer
GEOquery 2.80.0
Get data from NCBI Gene Expression Omnibus (GEO)7 versions - Latest release: 5 months ago - 47 dependent packages - 2.61 million downloads total - 118 stars on GitHub - 1 maintainer
Top 1.5% on bioconductor.org
16 versions - Latest release: 3 months ago - 15 dependent packages - 1.02 million downloads total - 234 stars on GitHub - 1 maintainer
xcms 4.10.1
LC-MS and GC-MS Data Analysis16 versions - Latest release: 3 months ago - 15 dependent packages - 1.02 million downloads total - 234 stars on GitHub - 1 maintainer
dar 1.8.0
Differential Abundance Analysis by Consensus5 versions - Latest release: 4 months ago - 10.2 thousand downloads total - 7 stars on GitHub - 1 maintainer
MsDataHub 1.12.1
Mass Spectrometry Data on ExperimentHub8 versions - Latest release: about 1 month ago - 2 dependent packages - 17.9 thousand downloads total - 2 stars on GitHub - 1 maintainer
Top 2.9% on bioconductor.org
8 versions - Latest release: 5 months ago - 8 dependent packages - 169 thousand downloads total - 377 stars on GitHub - 1 maintainer
karyoploteR 1.38.0
Plot customizable linear genomes displaying arbitrary data8 versions - Latest release: 5 months ago - 8 dependent packages - 169 thousand downloads total - 377 stars on GitHub - 1 maintainer
ramr 1.20.2
Detection of Rare Aberrantly Methylated Regions in Array and NGS Data8 versions - Latest release: 4 days ago - 20.5 thousand downloads total - 0 stars on GitHub - 1 maintainer
Rarr 2.0.1
Read Zarr Files in R9 versions - Latest release: 3 months ago - 26.1 thousand downloads total - 54 stars on GitHub - 1 maintainer
rBLAST 1.8.0
R Interface for the Basic Local Alignment Search Tool5 versions - Latest release: 5 months ago - 15.7 thousand downloads total - 115 stars on GitHub - 1 maintainer
BiocPkgTools 1.30.1
Collection of simple tools for learning about Bioconductor Packages11 versions - Latest release: about 2 months ago - 40.7 thousand downloads total - 22 stars on GitHub - 1 maintainer
cTRAP 1.30.0
Identification of candidate causal perturbations from differential gene expression data8 versions - Latest release: 4 months ago - 28.1 thousand downloads total - 9 stars on GitHub - 1 maintainer
crisprDesign 1.14.0
Comprehensive design of CRISPR gRNAs for nucleases and base editors7 versions - Latest release: 5 months ago - 3 dependent packages - 24.8 thousand downloads total - 33 stars on GitHub - 1 maintainer
recount3 1.22.0
Explore and download data from the recount3 project7 versions - Latest release: 5 months ago - 59.4 thousand downloads total - 41 stars on GitHub - 1 maintainer
Top 2.3% on bioconductor.org
9 versions - Latest release: 4 months ago - 13 dependent packages - 617 thousand downloads total - 145 stars on GitHub - 1 maintainer
tximport 1.40.0
Import and summarize transcript-level estimates for transcript- and gene-level analysis9 versions - Latest release: 4 months ago - 13 dependent packages - 617 thousand downloads total - 145 stars on GitHub - 1 maintainer
Top 2.6% on bioconductor.org
13 versions - Latest release: 4 months ago - 124 dependent packages - 5.5 million downloads total - 51 stars on GitHub - 1 maintainer
biomaRt 2.68.0
Interface to BioMart databases (i.e. Ensembl)13 versions - Latest release: 4 months ago - 124 dependent packages - 5.5 million downloads total - 51 stars on GitHub - 1 maintainer
Top 5.5% on bioconductor.org
7 versions - Latest release: 5 months ago - 6 dependent packages - 91.2 thousand downloads total - 205 stars on GitHub - 1 maintainer
splatter 1.36.0
Simple Simulation of Single-cell RNA Sequencing Data7 versions - Latest release: 5 months ago - 6 dependent packages - 91.2 thousand downloads total - 205 stars on GitHub - 1 maintainer
Top 3.5% on bioconductor.org
7 versions - Latest release: 5 months ago - 2 dependent packages - 941 thousand downloads total - 558 stars on GitHub - 1 maintainer
dada2 1.40.0
Accurate, high-resolution sample inference from amplicon sequencing data7 versions - Latest release: 5 months ago - 2 dependent packages - 941 thousand downloads total - 558 stars on GitHub - 1 maintainer
Top 2.7% on bioconductor.org
9 versions - Latest release: 5 months ago - 7 dependent packages - 652 thousand downloads total - 355 stars on GitHub - 2 maintainers
TCGAbiolinks 2.40.0
TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data9 versions - Latest release: 5 months ago - 7 dependent packages - 652 thousand downloads total - 355 stars on GitHub - 2 maintainers
biocthis 1.22.0
Automate package and project setup for Bioconductor packages7 versions - Latest release: 5 months ago - 2 dependent packages - 53.5 thousand downloads total - 56 stars on GitHub - 1 maintainer
RJMCMCNucleosomes 1.36.0
Bayesian hierarchical model for genome-wide nucleosome positioning with high-throughput short-rea...5 versions - Latest release: about 1 month ago - 22.8 thousand downloads total - 0 stars on GitHub - 1 maintainer
Top 4.4% on bioconductor.org
10 versions - Latest release: 10 days ago - 5 dependent packages - 468 thousand downloads total - 204 stars on GitHub - 1 maintainer
SingleR 2.14.2
Reference-Based Single-Cell RNA-Seq Annotation10 versions - Latest release: 10 days ago - 5 dependent packages - 468 thousand downloads total - 204 stars on GitHub - 1 maintainer
scp 1.22.0
Mass Spectrometry-Based Single-Cell Proteomics Data Analysis7 versions - Latest release: 4 months ago - 31.5 thousand downloads total - 33 stars on GitHub - 1 maintainer
rTRM 1.50.0
Identification of Transcriptional Regulatory Modules from Protein-Protein Interaction Networks7 versions - Latest release: 5 months ago - 1 dependent package - 37.7 thousand downloads total - 3 stars on GitHub - 1 maintainer
bambu 3.14.0
Context-Aware Transcript Quantification from Long Read RNA-Seq data12 versions - Latest release: 5 months ago - 1 dependent package - 46.7 thousand downloads total - 259 stars on GitHub - 1 maintainer
epialleleR 1.20.0
Fast, Accurate, Epiallele-Aware Methylation Caller and Reporter7 versions - Latest release: 5 months ago - 19.9 thousand downloads total - 7 stars on GitHub - 1 maintainer
crisprScore 1.16.0
On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs7 versions - Latest release: 5 months ago - 3 dependent packages - 25.4 thousand downloads total - 31 stars on GitHub - 1 maintainer
nucleoSim 1.40.0
Generate synthetic nucleosome maps7 versions - Latest release: 5 months ago - 1 dependent package - 23 thousand downloads total - 2 stars on GitHub - 1 maintainer
Top 3.3% on bioconductor.org
9 versions - Latest release: 2 months ago - 40 dependent packages - 1.73 million downloads total - 36 stars on GitHub - 1 maintainer
ensembldb 2.36.1
Utilities to create and use Ensembl-based annotation databases9 versions - Latest release: 2 months ago - 40 dependent packages - 1.73 million downloads total - 36 stars on GitHub - 1 maintainer
Top 6.7% on bioconductor.org
8 versions - Latest release: 5 months ago - 7 dependent packages - 250 thousand downloads total - 59 stars on GitHub - 1 maintainer
mia 1.20.0
Microbiome analysis8 versions - Latest release: 5 months ago - 7 dependent packages - 250 thousand downloads total - 59 stars on GitHub - 1 maintainer
RLSeq 1.6.0 removed
RLSeq: An analysis package for R-loop mapping data3 versions - Latest release: almost 3 years ago - 2.67 thousand downloads total - 2 stars on GitHub - 1 maintainer
esATAC 1.34.0
An Easy-to-use Systematic pipeline for ATACseq data analysis7 versions - Latest release: 4 months ago - 42.9 thousand downloads total - 24 stars on GitHub - 1 maintainer
GeneTonic 3.6.0
Enjoy Analyzing And Integrating The Results From Differential Expression Analysis And Functional ...7 versions - Latest release: 4 months ago - 1 dependent package - 28.8 thousand downloads total - 83 stars on GitHub - 1 maintainer
Voyager 1.14.0
From geospatial to spatial omics7 versions - Latest release: 5 months ago - 24.6 thousand downloads total - 104 stars on GitHub - 1 maintainer
DeconvoBuddies 1.4.0
Helper Functions for LIBD Deconvolution3 versions - Latest release: 5 months ago - 12.1 thousand downloads total - 11 stars on GitHub - 1 maintainer
Top 1.9% on bioconductor.org
10 versions - Latest release: about 2 months ago - 30 dependent packages - 660 thousand downloads total - 137 stars on GitHub - 1 maintainer
MSnbase 2.38.1
Base Functions and Classes for Mass Spectrometry and Proteomics10 versions - Latest release: about 2 months ago - 30 dependent packages - 660 thousand downloads total - 137 stars on GitHub - 1 maintainer
Top 8.6% on bioconductor.org
13 versions - Latest release: 3 months ago - 15 dependent packages - 198 thousand downloads total - 47 stars on GitHub - 1 maintainer
Spectra 1.22.2
Spectra Infrastructure for Mass Spectrometry Data13 versions - Latest release: 3 months ago - 15 dependent packages - 198 thousand downloads total - 47 stars on GitHub - 1 maintainer
Top 9.0% on bioconductor.org
7 versions - Latest release: 5 months ago - 12 dependent packages - 652 thousand downloads total - 5 stars on GitHub - 1 maintainer
illuminaio 0.54.0
Parsing Illumina Microarray Output Files7 versions - Latest release: 5 months ago - 12 dependent packages - 652 thousand downloads total - 5 stars on GitHub - 1 maintainer
Top 4.3% on bioconductor.org
7 versions - Latest release: 5 months ago - 22 dependent packages - 173 thousand downloads total - 156 stars on GitHub - 1 maintainer
plyranges 1.32.0
A fluent interface for manipulating GenomicRanges7 versions - Latest release: 5 months ago - 22 dependent packages - 173 thousand downloads total - 156 stars on GitHub - 1 maintainer
iSEEhex 1.14.0
iSEE extension for summarising data points in hexagonal bins7 versions - Latest release: 4 months ago - 1 dependent package - 14.6 thousand downloads total - 0 stars on GitHub - 1 maintainer
cmapR 1.24.0
CMap Tools in R7 versions - Latest release: 4 months ago - 56.2 thousand downloads total - 94 stars on GitHub - 1 maintainer
qsvaR 1.16.0
Generate Quality Surrogate Variable Analysis for Degradation Correction7 versions - Latest release: 4 months ago - 14.7 thousand downloads total - 0 stars on GitHub - 1 maintainer
miaViz 1.20.0
Microbiome Analysis Plotting and Visualization8 versions - Latest release: 4 months ago - 2 dependent packages - 31.5 thousand downloads total - 13 stars on GitHub - 1 maintainer
cogena 1.46.0
co-expressed gene-set enrichment analysis7 versions - Latest release: 5 months ago - 33.5 thousand downloads total - 13 stars on GitHub - 1 maintainer
brainflowprobes 1.20.0 removed
Plots and annotation for choosing BrainFlow target probe sequence4 versions - Latest release: almost 2 years ago - 5.9 thousand downloads total - 0 stars on GitHub - 1 maintainer
crisprBase 1.16.0
Base functions and classes for CRISPR gRNA design7 versions - Latest release: 4 months ago - 6 dependent packages - 23.7 thousand downloads total - 6 stars on GitHub - 1 maintainer
rRDP 1.44.0 removed
Interface to the RDP Classifier6 versions - Latest release: 10 months ago - 22.2 thousand downloads total - 3 stars on GitHub - 1 maintainer
Top 5.2% on bioconductor.org
9 versions - Latest release: 4 months ago - 3 dependent packages - 94.5 thousand downloads total - 16 stars on GitHub - 1 maintainer
pRoloc 1.52.0
A unifying bioinformatics framework for spatial proteomics9 versions - Latest release: 4 months ago - 3 dependent packages - 94.5 thousand downloads total - 16 stars on GitHub - 1 maintainer
tidySummarizedExperiment 1.22.0
Brings SummarizedExperiment to the Tidyverse8 versions - Latest release: 4 months ago - 5 dependent packages - 30.1 thousand downloads total - 31 stars on GitHub - 1 maintainer
tidybulk 2.2.0
Brings transcriptomics to the tidyverse9 versions - Latest release: 5 months ago - 1 dependent package - 32.7 thousand downloads total - 182 stars on GitHub - 1 maintainer
ImmuneSpaceR 1.32.0 removed
A Thin Wrapper around the ImmuneSpace Data and Tools Portal3 versions - Latest release: over 2 years ago - 12.5 thousand downloads total - 24 stars on GitHub - 1 maintainer
ideal 2.6.0
Interactive Differential Expression AnaLysis7 versions - Latest release: 5 months ago - 37.1 thousand downloads total - 34 stars on GitHub - 1 maintainer
dce 1.13.0 removed
Pathway Enrichment Based on Differential Causal Effects4 versions - Latest release: almost 2 years ago - 6.79 thousand downloads total - 14 stars on GitHub - 1 maintainer
chromswitch 1.22.0 removed
An R package to detect chromatin state switches from epigenomic data1 version - Latest release: almost 3 years ago - 7.34 thousand downloads total - 5 stars on GitHub - 1 maintainer
SpotSweeper 1.8.0
Spatially-aware quality control for spatial transcriptomics9 versions - Latest release: 4 months ago - 16.5 thousand downloads total - 17 stars on GitHub - 1 maintainer
signeR 2.14.0
Empirical Bayesian approach to mutational signature discovery7 versions - Latest release: 5 months ago - 32.8 thousand downloads total - 14 stars on GitHub - 1 maintainer
Modstrings 1.28.0
Working with modified nucleotide sequences7 versions - Latest release: 5 months ago - 4 dependent packages - 30.8 thousand downloads total - 1 stars on GitHub - 1 maintainer
Top 8.2% on bioconductor.org
10 versions - Latest release: 5 months ago - 6 dependent packages - 190 thousand downloads total - 210 stars on GitHub - 1 maintainer
zellkonverter 1.22.0
Conversion Between scRNA-seq Objects10 versions - Latest release: 5 months ago - 6 dependent packages - 190 thousand downloads total - 210 stars on GitHub - 1 maintainer
lipidr 2.26.0
Data Mining and Analysis of Lipidomics Datasets8 versions - Latest release: 5 months ago - 1 dependent package - 29 thousand downloads total - 36 stars on GitHub - 1 maintainer
cytoviewer 1.12.0
An interactive multi-channel image viewer for R7 versions - Latest release: 4 months ago - 15.8 thousand downloads total - 7 stars on GitHub - 1 maintainer
QFeatures 1.22.0
Quantitative features for mass spectrometry data9 versions - Latest release: 5 months ago - 6 dependent packages - 198 thousand downloads total - 29 stars on GitHub - 1 maintainer
Top 5.2% on bioconductor.org
11 versions - Latest release: 4 months ago - 1 dependent package - 103 thousand downloads total - 30 stars on GitHub - 1 maintainer
DEGreport 1.48.0
Report of DEG analysis11 versions - Latest release: 4 months ago - 1 dependent package - 103 thousand downloads total - 30 stars on GitHub - 1 maintainer
tRNAdbImport 1.30.0
Importing from tRNAdb and mitotRNAdb as GRanges objects8 versions - Latest release: 4 months ago - 1 dependent package - 24.4 thousand downloads total - 0 stars on GitHub - 1 maintainer
mistyR 1.20.0
Multiview Intercellular SpaTial modeling framework8 versions - Latest release: 4 months ago - 19 thousand downloads total - 74 stars on GitHub - 1 maintainer
isomiRs 1.40.0
Analyze isomiRs and miRNAs from small RNA-seq9 versions - Latest release: 5 months ago - 31.9 thousand downloads total - 7 stars on GitHub - 1 maintainer
affxparser 1.84.0
Affymetrix File Parsing SDK7 versions - Latest release: 5 months ago - 10 dependent packages - 437 thousand downloads total - 8 stars on GitHub - 1 maintainer
POMA 1.22.0
Tools for Omics Data Analysis7 versions - Latest release: 4 months ago - 1 dependent package - 23.8 thousand downloads total - 15 stars on GitHub - 1 maintainer
RBioFormats 1.12.0
R interface to Bio-Formats7 versions - Latest release: 5 months ago - 1 dependent package - 22.5 thousand downloads total - 27 stars on GitHub - 1 maintainer
tRNA 1.30.0
Analyzing tRNA sequences and structures8 versions - Latest release: 5 months ago - 2 dependent packages - 25.7 thousand downloads total - 0 stars on GitHub - 1 maintainer
tRNAscanImport 1.32.0
Importing a tRNAscan-SE result file as GRanges object7 versions - Latest release: 5 months ago - 2 dependent packages - 22.3 thousand downloads total - 2 stars on GitHub - 1 maintainer
RNAmodR.AlkAnilineSeq 1.26.0
Detection of m7G, m3C and D modification by AlkAnilineSeq7 versions - Latest release: 3 months ago - 1 dependent package - 18.2 thousand downloads total - 2 stars on GitHub - 1 maintainer
GOexpress 1.46.0
Visualise microarray and RNAseq data using gene ontology annotations7 versions - Latest release: 5 months ago - 1 dependent package - 41.8 thousand downloads total - 10 stars on GitHub - 1 maintainer
Top 7.0% on bioconductor.org
7 versions - Latest release: 4 months ago - 20 dependent packages - 1.66 million downloads total - 8 stars on GitHub - 1 maintainer
ProtGenerics 1.44.0
Generic infrastructure for Bioconductor mass spectrometry packages7 versions - Latest release: 4 months ago - 20 dependent packages - 1.66 million downloads total - 8 stars on GitHub - 1 maintainer
segmenter 1.18.0
Perform Chromatin Segmentation Analysis in R by Calling ChromHMM7 versions - Latest release: 5 months ago - 15 thousand downloads total - 3 stars on GitHub - 1 maintainer
TREG 1.16.0
Tools for finding Total RNA Expression Genes in single nucleus RNA-seq data7 versions - Latest release: 4 months ago - 12.8 thousand downloads total - 5 stars on GitHub - 1 maintainer
geneXtendeR 1.37.0
Optimized Functional Annotation Of ChIP-seq Data7 versions - Latest release: 4 months ago - 26.4 thousand downloads total - 10 stars on GitHub - 1 maintainer
similaRpeak 1.44.0
Metrics to estimate a level of similarity between two ChIP-Seq profiles7 versions - Latest release: 5 months ago - 1 dependent package - 29 thousand downloads total - 7 stars on GitHub - 1 maintainer
rmelting 1.28.0
R Interface to MELTING 57 versions - Latest release: 4 months ago - 16.7 thousand downloads total - 2 stars on GitHub - 1 maintainer
Top 5.0% on bioconductor.org
10 versions - Latest release: 5 months ago - 19 dependent packages - 393 thousand downloads total - 17 stars on GitHub - 1 maintainer
MsCoreUtils 1.24.0
Core Utils for Mass Spectrometry Data10 versions - Latest release: 5 months ago - 19 dependent packages - 393 thousand downloads total - 17 stars on GitHub - 1 maintainer
tidySingleCellExperiment 1.22.0
Brings SingleCellExperiment to the Tidyverse8 versions - Latest release: 5 months ago - 4 dependent packages - 29.8 thousand downloads total - 36 stars on GitHub - 1 maintainer
Top 4.5% on bioconductor.org
7 versions - Latest release: 4 months ago - 6 dependent packages - 113 thousand downloads total - 45 stars on GitHub - 1 maintainer
derfinder 1.46.0
Annotation-agnostic differential expression analysis of RNA-seq data at base-pair resolution via ...7 versions - Latest release: 4 months ago - 6 dependent packages - 113 thousand downloads total - 45 stars on GitHub - 1 maintainer
Top 4.3% on bioconductor.org
8 versions - Latest release: 5 months ago - 226 thousand downloads total - 1 stars on GitHub - 1 maintainer
arrayQualityMetrics 3.68.0
Quality metrics report for microarray data sets8 versions - Latest release: 5 months ago - 226 thousand downloads total - 1 stars on GitHub - 1 maintainer
EpiCompare 1.16.0
Comparison, Benchmarking & QC of Epigenomic Datasets16 versions - Latest release: 5 months ago - 13.2 thousand downloads total - 19 stars on GitHub - 1 maintainer
crisprBowtie 1.16.0
Bowtie-based alignment of CRISPR gRNA spacer sequences7 versions - Latest release: 4 months ago - 2 dependent packages - 18.8 thousand downloads total - 3 stars on GitHub - 1 maintainer
iSEEpathways 1.10.0
iSEE extension for panels related to pathway analysis6 versions - Latest release: 5 months ago - 11.2 thousand downloads total - 1 stars on GitHub - 1 maintainer
GraphExperiment 1.0.2
S4 Class for Quantitative Data and Associated Networks2 versions - Latest release: about 1 month ago - 3.64 thousand downloads total - 1 stars on GitHub - 1 maintainer
MDSvis 1.0.0
Plots of Multi Dimensional Scaling (MDS) results1 version - Latest release: 5 months ago - 2.99 thousand downloads total - 0 stars on GitHub - 1 maintainer
TargetDecoy 1.18.0
Diagnostic Plots to Evaluate the Target Decoy Approach7 versions - Latest release: 5 months ago - 14.2 thousand downloads total - 1 stars on GitHub - 1 maintainer
TEKRABber 1.16.0
An R package estimates the correlations of orthologs and transposable elements between two species8 versions - Latest release: 4 months ago - 15.2 thousand downloads total - 3 stars on GitHub - 1 maintainer
sevenbridges 1.42.0
Seven Bridges Platform API Client and Common Workflow Language Tool Builder in R7 versions - Latest release: 4 months ago - 28 thousand downloads total - 37 stars on GitHub - 1 maintainer
nullranges 1.18.0
Generation of null ranges via bootstrapping or covariate matching8 versions - Latest release: 5 months ago - 1 dependent package - 22.9 thousand downloads total - 29 stars on GitHub - 1 maintainer
CTexploreR 1.8.0
Explores Cancer Testis Genes5 versions - Latest release: 5 months ago - 10.5 thousand downloads total - 0 stars on GitHub - 1 maintainer
iSEEhub 1.14.0
iSEE for the Bioconductor ExperimentHub7 versions - Latest release: 5 months ago - 15.1 thousand downloads total - 3 stars on GitHub - 1 maintainer
methylInheritance 1.36.0
Permutation-Based Analysis associating Conserved Differentially Methylated Elements Across Multip...8 versions - Latest release: 4 months ago - 1 dependent package - 23.9 thousand downloads total - 0 stars on GitHub - 1 maintainer
fishpond 2.18.0
Fishpond: downstream methods and tools for expression data7 versions - Latest release: 5 months ago - 1 dependent package - 71.9 thousand downloads total - 32 stars on GitHub - 1 maintainer
DiscoRhythm 1.28.0
Interactive Workflow for Discovering Rhythmicity in Biological Data7 versions - Latest release: 5 months ago - 19.8 thousand downloads total - 14 stars on GitHub - 1 maintainer
iSEEindex 1.10.0
iSEE extension for a landing page to a custom collection of data sets6 versions - Latest release: 4 months ago - 9.61 thousand downloads total - 2 stars on GitHub - 1 maintainer
crisprBwa 1.16.0
BWA-based alignment of CRISPR gRNA spacer sequences7 versions - Latest release: 5 months ago - 1 dependent package - 12.2 thousand downloads total - 2 stars on GitHub - 1 maintainer
orthogene 1.18.1
Gene mapping made easy9 versions - Latest release: 5 months ago - 1 dependent package - 39.5 thousand downloads total - 58 stars on GitHub - 1 maintainer
Related Keywords
Software
133
r
63
Sequencing
39
Visualization
38
GeneExpression
36
DataImport
36
Infrastructure
29
DifferentialExpression
29
ImmunoOncology
29
rstats
27
bioinformatics
26
RNASeq
26
Transcriptomics
19
QualityControl
17
Coverage
15
Transcription
15
bioconductor-package
14
SingleCell
14
MultipleComparison
13
MassSpectrometry
13
r-package
12
Proteomics
11
Normalization
11
mass-spectrometry
11
FunctionalGenomics
10
Clustering
10
proteomics
10
Genetics
9
Alignment
9
GUI
9
DataRepresentation
9
Microarray
9
genomics
9
Pathways
9
Epigenetics
9
GeneSetEnrichment
9
rnaseq
8
Classification
8
ChIPSeq
8
Preprocessing
8
Network
7
StatisticalMethod
7
shiny
7
OneChannel
7
Annotation
7
ReportWriting
7
crispr
6
WorkflowStep
6
CRISPR
6
crispr-design
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transcriptomics
6
ShinyApps
6
grna
6
Metabolomics
6
metabolomics
6
grna-sequence
6
grna-sequences
6
derfinder
6
Regression
6
GO
6
rna
5
deseq2
5
Spatial
5
Microbiome
5
DNAMethylation
5
sgrna-design
5
PrincipalComponent
5
sgrna
5
crispr-target
5
package
5
sequences
5
crispr-cas9
5
hacktoberfest
5
rna-seq-analysis
4
spatial-transcriptomics
4
BiologicalQuestion
4
DifferentialMethylation
4
GeneTarget
4
MethylSeq
4
scrna-seq
4
ATACSeq
4
SequenceMatching
4
TwoChannel
4
data-visualization
4
HistoneModification
4
FlowCytometry
4
user-friendly
4
DifferentialPeakCalling
4
structures
4
gene-expression
4
GeneRegulation
4
chip-seq
4
microbiome
4
BiomedicalInformatics
3
differential-expression
3
reproducible-research
3
Bayesian
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DNaseSeq
3
ExperimentHubSoftware
3
GenomeAnnotation
3