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bioconductor.org "DNaseSeq" keyword

View the packages on the bioconductor.org package registry that are tagged with the "DNaseSeq" keyword.

nullranges 1.14.0
Generation of null ranges via bootstrapping or covariate matching
5 versions - Latest release: 2 months ago - 1 dependent package - 11 thousand downloads total - 22 stars on GitHub - 1 maintainer
BiFET 1.28.0
Bias-free Footprint Enrichment Test
5 versions - Latest release: 3 months ago - 14.5 thousand downloads total - 1 maintainer
esATAC 1.30.0
An Easy-to-use Systematic pipeline for ATACseq data analysis
5 versions - Latest release: 3 months ago - 24.6 thousand downloads total - 23 stars on GitHub - 1 maintainer
Top 2.4% on bioconductor.org
DiffBind 3.18.0
Differential Binding Analysis of ChIP-Seq Peak Data
5 versions - Latest release: 3 months ago - 2 dependent packages - 266 thousand downloads total - 1 maintainer
epigraHMM 1.16.0
Epigenomic R-based analysis with hidden Markov models
5 versions - Latest release: 3 months ago - 6.74 thousand downloads total - 1 maintainer
COCOA 2.22.0
Coordinate Covariation Analysis
5 versions - Latest release: 3 months ago - 11.2 thousand downloads total - 1 maintainer
EpiCompare 1.12.0
Comparison, Benchmarking & QC of Epigenomic Datasets
13 versions - Latest release: 3 months ago - 4.63 thousand downloads total - 17 stars on GitHub - 1 maintainer
DegCre 1.4.0
Probabilistic association of DEGs to CREs from differential data
3 versions - Latest release: 3 months ago - 3.17 thousand downloads total - 5 stars on GitHub - 1 maintainer
HicAggR 1.2.0
Set of 3D genomic interaction analysis tools
3 versions - Latest release: 8 months ago - 1.59 thousand downloads total - 1 stars on GitHub - 1 maintainer