bioconductor.org "DNAMethylation" keyword
epimutacions 1.16.2
Robust outlier identification for DNA methylation data9 versions - Latest release: about 18 hours ago - 17.9 thousand downloads total - 0 stars on GitHub - 1 maintainer
Top 0.6% on bioconductor.org
30 versions - Latest release: 3 days ago - 181 dependent packages - 4.73 million downloads total - 4 maintainers
edgeR 4.10.5
Empirical Analysis of Digital Gene Expression Data in R30 versions - Latest release: 3 days ago - 181 dependent packages - 4.73 million downloads total - 4 maintainers
pathwayPCA 1.28.0
Integrative Pathway Analysis with Modern PCA Methodology and Gene Selection7 versions - Latest release: 4 months ago - 1 dependent package - 24.7 thousand downloads total - 11 stars on GitHub - 1 maintainer
Harman 1.40.0
The removal of batch effects from datasets using a PCA and constrained optimisation based technique7 versions - Latest release: 4 months ago - 1 dependent package - 41.9 thousand downloads total - 1 maintainer
iscream 1.2.0
Make fast and memory efficient BED file queries, summaries and matrices2 versions - Latest release: 3 months ago - 7.82 thousand downloads total - 0 stars on GitHub - 1 maintainer
Top 1.9% on bioconductor.org
9 versions - Latest release: 4 months ago - 31 dependent packages - 1.01 million downloads total - 64 stars on GitHub - 1 maintainer
minfi 1.58.0
Analyze Illumina Infinium DNA methylation arrays9 versions - Latest release: 4 months ago - 31 dependent packages - 1.01 million downloads total - 64 stars on GitHub - 1 maintainer
Top 3.3% on bioconductor.org
8 versions - Latest release: 4 months ago - 5 dependent packages - 206 thousand downloads total - 4 maintainers
missMethyl 1.46.0
Analysing Illumina HumanMethylation BeadChip Data8 versions - Latest release: 4 months ago - 5 dependent packages - 206 thousand downloads total - 4 maintainers
Top 1.8% on bioconductor.org
7 versions - Latest release: 5 months ago - 10 dependent packages - 432 thousand downloads total - 1 maintainer
lumi 2.64.0
BeadArray Specific Methods for Illumina Methylation and Expression Microarrays7 versions - Latest release: 5 months ago - 10 dependent packages - 432 thousand downloads total - 1 maintainer
Top 3.8% on bioconductor.org
8 versions - Latest release: 4 months ago - 3 dependent packages - 174 thousand downloads total - 261 stars on GitHub - 2 maintainers
methylKit 1.38.0
DNA methylation analysis from high-throughput bisulfite sequencing results8 versions - Latest release: 4 months ago - 3 dependent packages - 174 thousand downloads total - 261 stars on GitHub - 2 maintainers
betaHMM 1.8.0
A Hidden Markov Model Approach for Identifying Differentially Methylated Sites and Regions for Be...7 versions - Latest release: 4 months ago - 12.8 thousand downloads total - 1 maintainer
mCSEA 1.32.0
Methylated CpGs Set Enrichment Analysis9 versions - Latest release: 4 months ago - 1 dependent package - 29.3 thousand downloads total - 1 maintainer
Top 4.7% on bioconductor.org
7 versions - Latest release: 4 months ago - 1 dependent package - 94.2 thousand downloads total - 1 maintainer
RnBeads 2.30.0
RnBeads7 versions - Latest release: 4 months ago - 1 dependent package - 94.2 thousand downloads total - 1 maintainer
TurboNorm 1.60.0
A fast scatterplot smoother suitable for microarray normalization7 versions - Latest release: 4 months ago - 41 thousand downloads total - 1 maintainer
ARRmNormalization 1.52.0
Adaptive Robust Regression normalization for Illumina methylation data7 versions - Latest release: 4 months ago - 37.4 thousand downloads total - 1 maintainer
Top 5.5% on bioconductor.org
7 versions - Latest release: 4 months ago - 74.3 thousand downloads total - 1 maintainer
MEDIPS 1.64.0
DNA IP-seq data analysis7 versions - Latest release: 4 months ago - 74.3 thousand downloads total - 1 maintainer
MPFE 1.48.0
Estimation of the amplicon methylation pattern distribution from bisulphite sequencing data7 versions - Latest release: 4 months ago - 23.8 thousand downloads total - 1 maintainer
EpiMix 1.14.0
EpiMix: an integrative tool for the population-level analysis of DNA methylation7 versions - Latest release: 4 months ago - 1 dependent package - 15.8 thousand downloads total - 1 stars on GitHub - 1 maintainer
TOAST 1.26.0
Tools for the analysis of heterogeneous tissues7 versions - Latest release: 4 months ago - 3 dependent packages - 50.5 thousand downloads total - 8 stars on GitHub - 1 maintainer
GAprediction 1.38.0
Prediction of gestational age with Illumina HumanMethylation450 data7 versions - Latest release: 4 months ago - 21.1 thousand downloads total - 1 maintainer
GeoTcgaData 2.12.0
Processing Various Types of Data on GEO and TCGA7 versions - Latest release: 4 months ago - 16.2 thousand downloads total - 27 stars on GitHub - 1 maintainer
MEAL 1.42.0
Perform methylation analysis7 versions - Latest release: 4 months ago - 33 thousand downloads total - 1 maintainer
Top 10.0% on bioconductor.org
7 versions - Latest release: 4 months ago - 2 dependent packages - 72.9 thousand downloads total - 58 stars on GitHub - 1 maintainer
EpiDISH 2.28.0
Epigenetic Dissection of Intra-Sample-Heterogeneity7 versions - Latest release: 4 months ago - 2 dependent packages - 72.9 thousand downloads total - 58 stars on GitHub - 1 maintainer
Top 2.7% on bioconductor.org
9 versions - Latest release: 4 months ago - 7 dependent packages - 644 thousand downloads total - 354 stars on GitHub - 2 maintainers
TCGAbiolinks 2.40.0
TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data9 versions - Latest release: 4 months ago - 7 dependent packages - 644 thousand downloads total - 354 stars on GitHub - 2 maintainers
methimpute 1.34.0
Imputation-guided re-construction of complete methylomes from WGBS data7 versions - Latest release: 4 months ago - 24.8 thousand downloads total - 1 maintainer
MethPed 1.40.0
A DNA methylation classifier tool for the identification of pediatric brain tumor subtypes7 versions - Latest release: 4 months ago - 26.7 thousand downloads total - 1 maintainer
skewr 1.44.0
Visualize Intensities Produced by Illumina's Human Methylation 450k BeadChip7 versions - Latest release: 4 months ago - 26.1 thousand downloads total - 1 maintainer
Top 9.3% on bioconductor.org
7 versions - Latest release: 4 months ago - 45.3 thousand downloads total - 1 maintainer
HELP 1.70.0
Tools for HELP data analysis7 versions - Latest release: 4 months ago - 45.3 thousand downloads total - 1 maintainer
qsea 1.38.0
IP-seq data analysis and vizualization7 versions - Latest release: 3 months ago - 27.2 thousand downloads total - 1 maintainer
funtooNorm 1.36.0
Normalization Procedure for Infinium HumanMethylation450 BeadChip Kit7 versions - Latest release: 5 months ago - 22.2 thousand downloads total - 1 maintainer
normalize450K 1.40.0
Preprocessing of Illumina Infinium 450K data7 versions - Latest release: 3 months ago - 22.7 thousand downloads total - 1 maintainer
omicsPrint 1.32.0
Cross omic genetic fingerprinting7 versions - Latest release: 3 months ago - 23.7 thousand downloads total - 1 maintainer
Top 6.6% on bioconductor.org
8 versions - Latest release: 12 days ago - 7 dependent packages - 414 thousand downloads total - 8 stars on GitHub - 1 maintainer
methylumi 2.58.1
Handle Illumina methylation data8 versions - Latest release: 12 days ago - 7 dependent packages - 414 thousand downloads total - 8 stars on GitHub - 1 maintainer
Top 4.3% on bioconductor.org
8 versions - Latest release: 4 months ago - 1 dependent package - 171 thousand downloads total - 1 maintainer
ChAMP 2.42.0
Chip Analysis Methylation Pipeline for Illumina HumanMethylation450 and EPIC8 versions - Latest release: 4 months ago - 1 dependent package - 171 thousand downloads total - 1 maintainer
MoonlightR 1.38.0
Identify oncogenes and tumor suppressor genes from omics data7 versions - Latest release: 3 months ago - 26.3 thousand downloads total - 17 stars on GitHub - 1 maintainer
SOMNiBUS 1.20.0
Smooth modeling of bisulfite sequencing8 versions - Latest release: 3 months ago - 12.9 thousand downloads total - 1 stars on GitHub - 1 maintainer
regionalpcs 1.10.0
Summarizing Regional Methylation with Regional Principal Components Analysis7 versions - Latest release: 3 months ago - 9.68 thousand downloads total - 4 stars on GitHub - 1 maintainer
BEclear 2.28.0
Correction of batch effects in DNA methylation data7 versions - Latest release: 3 months ago - 29.2 thousand downloads total - 5 stars on GitHub - 1 maintainer
MEAT 1.24.0
Muscle Epigenetic Age Test7 versions - Latest release: 4 months ago - 18.4 thousand downloads total - 1 stars on GitHub - 1 maintainer
ENmix 1.48.3
Quality control and analysis tools for Illumina DNA methylation BeadChip14 versions - Latest release: about 2 months ago - 57.7 thousand downloads total - 1 maintainer
methylscaper 1.20.0
Visualization of Methylation Data8 versions - Latest release: 4 months ago - 14.6 thousand downloads total - 1 stars on GitHub - 1 maintainer
Top 3.7% on bioconductor.org
8 versions - Latest release: 4 months ago - 12 dependent packages - 311 thousand downloads total - 38 stars on GitHub - 1 maintainer
bsseq 1.48.0
Analyze, manage and store whole-genome methylation data8 versions - Latest release: 4 months ago - 12 dependent packages - 311 thousand downloads total - 38 stars on GitHub - 1 maintainer
shinyepico 1.20.0
ShinyÉPICo7 versions - Latest release: 4 months ago - 16.3 thousand downloads total - 5 stars on GitHub - 1 maintainer
Moonlight2R 1.10.1
Identify oncogenes and tumor suppressor genes from omics data9 versions - Latest release: 2 months ago - 12.2 thousand downloads total - 5 stars on GitHub - 1 maintainer
RBedMethyl 1.0.0
Disk-backed Representation of ONT bedMethyl Files1 version - Latest release: 5 months ago - 3.36 thousand downloads total - 0 stars on GitHub - 1 maintainer
Top 4.7% on bioconductor.org
7 versions - Latest release: 4 months ago - 15 dependent packages - 614 thousand downloads total - 18 stars on GitHub - 1 maintainer
bumphunter 1.54.0
Bump Hunter7 versions - Latest release: 4 months ago - 15 dependent packages - 614 thousand downloads total - 18 stars on GitHub - 1 maintainer
methyLImp2 1.8.0
Missing value estimation of DNA methylation data5 versions - Latest release: 4 months ago - 9.74 thousand downloads total - 9 stars on GitHub - 1 maintainer
methInheritSim 1.34.0
Simulating Whole-Genome Inherited Bisulphite Sequencing Data7 versions - Latest release: 3 months ago - 1 dependent package - 22.2 thousand downloads total - 2 stars on GitHub - 1 maintainer
coMethDMR 1.16.0
Accurate identification of co-methylated and differentially methylated regions in epigenome-wide ...7 versions - Latest release: 4 months ago - 14.5 thousand downloads total - 7 stars on GitHub - 1 maintainer
mist 1.4.0
Differential Methylation Analysis for scDNAm Data4 versions - Latest release: 4 months ago - 6.53 thousand downloads total - 2 stars on GitHub - 1 maintainer
recountmethylation 1.22.0
Access and analyze public DNA methylation array data compilations7 versions - Latest release: 3 months ago - 17.9 thousand downloads total - 9 stars on GitHub - 1 maintainer
decemedip 1.0.0
hierarchical Bayesian modeling for cell type deconvolution of immunoprecipitation-based DNA methy...1 version - Latest release: 5 months ago - 4.1 thousand downloads total - 4 stars on GitHub - 1 maintainer
CTexploreR 1.8.0
Explores Cancer Testis Genes5 versions - Latest release: 4 months ago - 10.5 thousand downloads total - 0 stars on GitHub - 1 maintainer
dmGsea 1.2.2
Efficient Gene Set Enrichment Analysis for DNA Methylation Data6 versions - Latest release: 24 days ago - 6.69 thousand downloads total - 1 maintainer
methylInheritance 1.36.0
Permutation-Based Analysis associating Conserved Differentially Methylated Elements Across Multip...8 versions - Latest release: 4 months ago - 1 dependent package - 23.9 thousand downloads total - 0 stars on GitHub - 1 maintainer
spiky 1.18.0
Spike-in calibration for cell-free MeDIP7 versions - Latest release: 4 months ago - 12.9 thousand downloads total - 3 stars on GitHub - 1 maintainer
MethylAid 1.46.0
Visual and interactive quality control of large Illumina DNA Methylation array data sets7 versions - Latest release: 4 months ago - 37.3 thousand downloads total - 1 maintainer
DMRcaller 1.44.0
Differentially Methylated Regions Caller7 versions - Latest release: 4 months ago - 34.9 thousand downloads total - 1 maintainer
TENET 1.4.0
R package for TENET (Tracing regulatory Element Networks using Epigenetic Traits) to identify key...4 versions - Latest release: 4 months ago - 6.98 thousand downloads total - 1 stars on GitHub - 1 maintainer
Top 8.9% on bioconductor.org
7 versions - Latest release: 4 months ago - 44 thousand downloads total - 1 maintainer
MEDME 1.72.0
Modelling Experimental Data from MeDIP Enrichment7 versions - Latest release: 4 months ago - 44 thousand downloads total - 1 maintainer
BEAT 1.50.0
BEAT - BS-Seq Epimutation Analysis Toolkit7 versions - Latest release: 4 months ago - 33.3 thousand downloads total - 1 maintainer
methrix 1.26.0
Fast and efficient summarization of generic bedGraph files from Bisufite sequencing8 versions - Latest release: 5 months ago - 1 dependent package - 23.6 thousand downloads total - 36 stars on GitHub - 1 maintainer
cfTools 1.12.0
Informatics Tools for Cell-Free DNA Study7 versions - Latest release: 3 months ago - 8.79 thousand downloads total - 11 stars on GitHub - 1 maintainer
knowYourCG 1.8.0
Functional analysis of DNA methylome datasets8 versions - Latest release: 4 months ago - 8.94 thousand downloads total - 7 stars on GitHub - 1 maintainer
REMP 1.36.0
Repetitive Element Methylation Prediction4 versions - Latest release: 25 days ago - 25.4 thousand downloads total - 3 stars on GitHub - 1 maintainer
Top 7.4% on bioconductor.org
8 versions - Latest release: 4 months ago - 56.5 thousand downloads total - 1 maintainer
ELMER 2.35.1
Inferring Regulatory Element Landscapes and Transcription Factor Networks Using Cancer Methylomes8 versions - Latest release: 4 months ago - 56.5 thousand downloads total - 1 maintainer
methylGSA 1.30.0
Gene Set Analysis Using the Outcome of Differential Methylation7 versions - Latest release: 4 months ago - 26.9 thousand downloads total - 13 stars on GitHub - 1 maintainer
Top 4.0% on bioconductor.org
7 versions - Latest release: 4 months ago - 1 dependent package - 106 thousand downloads total - 51 stars on GitHub - 1 maintainer
RTCGA 1.41.0
The Cancer Genome Atlas Data Integration7 versions - Latest release: 4 months ago - 1 dependent package - 106 thousand downloads total - 51 stars on GitHub - 1 maintainer
biscuiteer 1.26.0
Convenience Functions for Biscuit7 versions - Latest release: 3 months ago - 22.2 thousand downloads total - 6 stars on GitHub - 1 maintainer
mitch 1.24.0
Multi-Contrast Gene Set Enrichment Analysis10 versions - Latest release: 5 months ago - 18.9 thousand downloads total - 18 stars on GitHub - 1 maintainer
epialleleR 1.20.0
Fast, Accurate, Epiallele-Aware Methylation Caller and Reporter7 versions - Latest release: 5 months ago - 15.6 thousand downloads total - 7 stars on GitHub - 1 maintainer
NanoMethViz 3.8.0
Visualise methylation data from Oxford Nanopore sequencing7 versions - Latest release: 4 months ago - 19.8 thousand downloads total - 37 stars on GitHub - 1 maintainer
methodical 1.8.0
Discovering genomic regions where methylation is strongly associated with transcriptional activity6 versions - Latest release: 4 months ago - 9.15 thousand downloads total - 0 stars on GitHub - 1 maintainer
vmrseq 1.4.0
Probabilistic Modeling of Single-cell Methylation Heterogeneity4 versions - Latest release: 4 months ago - 6.32 thousand downloads total - 11 stars on GitHub - 1 maintainer
IntOMICS 1.4.0 removed
Integrative analysis of multi-omics data to infer regulatory networks3 versions - Latest release: over 2 years ago - 1.07 thousand downloads total - 0 stars on GitHub - 1 maintainer
planet 1.20.0
Placental DNA methylation analysis tools7 versions - Latest release: 4 months ago - 1 dependent package - 21.8 thousand downloads total - 4 stars on GitHub - 1 maintainer
Top 5.6% on bioconductor.org
11 versions - Latest release: 2 months ago - 4 dependent packages - 104 thousand downloads total - 84 stars on GitHub - 1 maintainer
sesame 1.30.1
SEnsible Step-wise Analysis of DNA MEthylation BeadChips11 versions - Latest release: 2 months ago - 4 dependent packages - 104 thousand downloads total - 84 stars on GitHub - 1 maintainer
Lheuristic 1.4.0
Detection of scatterplots with L-shaped pattern3 versions - Latest release: 4 months ago - 5.25 thousand downloads total - 0 stars on GitHub - 1 maintainer
methylCC 1.26.0
Estimate the cell composition of whole blood in DNA methylation samples8 versions - Latest release: 4 months ago - 20.8 thousand downloads total - 18 stars on GitHub - 1 maintainer
ramr 1.20.0
Detection of Rare Aberrantly Methylated Regions in Array and NGS Data7 versions - Latest release: 4 months ago - 15.7 thousand downloads total - 0 stars on GitHub - 1 maintainer
shinyMethyl 1.48.0
Interactive visualization for Illumina methylation arrays7 versions - Latest release: 4 months ago - 43.2 thousand downloads total - 6 stars on GitHub - 1 maintainer
deconvR 1.18.0
Simulation and Deconvolution of Omic Profiles8 versions - Latest release: 4 months ago - 17.1 thousand downloads total - 9 stars on GitHub - 1 maintainer
MAGAR 1.20.0
MAGAR: R-package to compute methylation Quantitative Trait Loci (methQTL) from DNA methylation an...7 versions - Latest release: 5 months ago - 15.4 thousand downloads total - 0 stars on GitHub - 1 maintainer
methylclock 1.18.0
Methylclock - DNA methylation-based clocks7 versions - Latest release: 4 months ago - 25.5 thousand downloads total - 55 stars on GitHub - 1 maintainer
cbaf 1.34.0
Automated functions for comparing various omic data from cbioportal.org8 versions - Latest release: 4 months ago - 20.8 thousand downloads total - 1 maintainer
conumee 1.46.0
Enhanced copy-number variation analysis using Illumina DNA methylation arrays7 versions - Latest release: 5 months ago - 43.6 thousand downloads total - 1 maintainer
epihet 1.16.0 removed
Determining Epigenetic Heterogeneity from Bisulfite Sequencing Data1 version - Latest release: almost 3 years ago - 4.09 thousand downloads total - 3 stars on GitHub - 1 maintainer
MBAmethyl 1.46.0
Model-based analysis of DNA methylation data7 versions - Latest release: 4 months ago - 21.7 thousand downloads total - 1 maintainer
BPRMeth 1.38.0
Model higher-order methylation profiles7 versions - Latest release: 4 months ago - 1 dependent package - 24.1 thousand downloads total - 1 maintainer
dmrseq 1.32.0
Detection and inference of differentially methylated regions from Whole Genome Bisulfite Sequencing10 versions - Latest release: 4 months ago - 1 dependent package - 42.1 thousand downloads total - 1 maintainer
PoDCall 1.20.0
Positive Droplet Calling for DNA Methylation Droplet Digital PCR8 versions - Latest release: 4 months ago - 11 thousand downloads total - 1 maintainer
ramwas 1.36.0
Fast Methylome-Wide Association Study Pipeline for Enrichment Platforms7 versions - Latest release: 4 months ago - 25.8 thousand downloads total - 1 maintainer
methylMnM 1.50.0
detect different methylation level (DMR)7 versions - Latest release: 4 months ago - 1 dependent package - 30.4 thousand downloads total
Top 9.9% on bioconductor.org
7 versions - Latest release: 3 months ago - 36.1 thousand downloads total - 1 maintainer
MassArray 1.64.0
Analytical Tools for MassArray Data7 versions - Latest release: 3 months ago - 36.1 thousand downloads total - 1 maintainer
iNETgrate 1.10.0
Integrates DNA methylation data with gene expression in a single gene network7 versions - Latest release: 4 months ago - 9.17 thousand downloads total - 65 stars on GitHub - 1 maintainer
iCheck 1.42.0
QC Pipeline and Data Analysis Tools for High-Dimensional Illumina mRNA Expression Data7 versions - Latest release: 4 months ago - 24 thousand downloads total - 1 maintainer
HIREewas 1.30.0
Detection of cell-type-specific risk-CpG sites in epigenome-wide association studies7 versions - Latest release: 4 months ago - 15.6 thousand downloads total - 1 maintainer
bigmelon 1.38.0
Illumina methylation array analysis for large experiments7 versions - Latest release: 4 months ago - 26.1 thousand downloads total - 1 maintainer
Melissa 1.28.0
Bayesian clustering and imputationa of single cell methylomes9 versions - Latest release: 3 months ago - 13 thousand downloads total - 1 maintainer
Top 5.4% on bioconductor.org
7 versions - Latest release: 4 months ago - 5 dependent packages - 193 thousand downloads total - 1 maintainer
wateRmelon 2.18.0
Illumina DNA methylation array normalization and metrics7 versions - Latest release: 4 months ago - 5 dependent packages - 193 thousand downloads total - 1 maintainer
Top 3.2% on bioconductor.org
8 versions - Latest release: 4 months ago - 10 dependent packages - 209 thousand downloads total - 2 maintainers
DSS 2.60.0
Dispersion shrinkage for sequencing data8 versions - Latest release: 4 months ago - 10 dependent packages - 209 thousand downloads total - 2 maintainers
Related Keywords
Software
126
Epigenetics
51
DifferentialMethylation
49
Sequencing
44
MethylationArray
42
Microarray
39
Preprocessing
34
ImmunoOncology
30
GeneExpression
30
MethylSeq
26
QualityControl
26
TwoChannel
20
DataImport
18
Normalization
18
DifferentialExpression
17
Coverage
17
Regression
15
Genetics
15
GeneRegulation
14
Visualization
13
CpGIsland
13
Transcription
12
SingleCell
12
RNASeq
11
MultipleComparison
10
StatisticalMethod
10
CopyNumberVariation
9
Transcriptomics
9
BiomedicalInformatics
9
dna-methylation
8
WholeGenome
8
Clustering
8
Pathways
8
BatchEffect
8
GeneSetEnrichment
8
Network
8
PrincipalComponent
7
Survival
7
FunctionalGenomics
7
ChIPSeq
7
SNP
6
GenomeWideAssociation
6
methylation
6
GenomeAnnotation
6
SystemsBiology
6
Bayesian
6
OneChannel
5
FeatureExtraction
5
bioconductor
5
GeneticVariability
4
bioinformatics
4
BiologicalQuestion
4
GenomicVariation
4
GeneTarget
4
Proteomics
4
Classification
4
r
3
CellBiology
3
DataRepresentation
3
MultiChannel
3
KEGG
3
bioconductor-package
3
HiddenMarkovModel
3
LongRead
2
NetworkEnrichment
2
epimutation
2
next-generation-sequencing
2
mRNAMicroarray
2
GraphAndNetwork
2
MotifAnnotation
2
NucleosomePositioning
2
GUI
2
r-package
2
omics
2
Infrastructure
2
inheritance
2
bayesian-inference
2
dna-methylation-data
2
GenePrediction
2
Annotation
2
Spatial
2
DimensionReduction
2
ATACSeq
2
TimeCourse
2
hidden-markov-model
1
probabilistic-models
1
ancestry
1
epigenetics
1
genetics
1
RiboSeq
1
inference
1
machine-learning
1
ExomeSeq
1
DNASeq
1
ChIPchip
1
epigenomics-workflow
1
dimensionality-reduction
1
computational-biology
1
short-read-sequencing
1
samtools
1