Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "sequencing" keyword
airrship 0.1.5
Simulation of B cell receptor repertoires6 versions - Latest release: about 1 year ago - 65 downloads last month - 6 stars on GitHub - 2 maintainers
s-rna-tools 0.0.3
Tools for handling Small RNA sequences.3 versions - Latest release: over 1 year ago - 11 downloads last month - 0 stars on GitHub - 1 maintainer
markmeld 0.3.0
Markmeld is a markup melder that combines structured yaml or markdown data into templated markdow...4 versions - Latest release: 7 months ago - 1 dependent repositories - 32 downloads last month - 2 maintainers
Top 5.4% on pypi.org
16 versions - Latest release: 19 days ago - 4 dependent packages - 6 dependent repositories - 499 downloads last month - 1,315 stars on GitHub - 3 maintainers
galaxy-files 24.0.2
Galaxy file source framework and default plugins16 versions - Latest release: 19 days ago - 4 dependent packages - 6 dependent repositories - 499 downloads last month - 1,315 stars on GitHub - 3 maintainers
Top 6.1% on pypi.org
16 versions - Latest release: 19 days ago - 3 dependent packages - 3 dependent repositories - 393 downloads last month - 1,315 stars on GitHub - 3 maintainers
galaxy-config 24.0.2
Galaxy configuration16 versions - Latest release: 19 days ago - 3 dependent packages - 3 dependent repositories - 393 downloads last month - 1,315 stars on GitHub - 3 maintainers
bartide 0.3.2
A Python package to extract, correct and analyze nucleotide barcodes from sequenced reads.6 versions - Latest release: over 1 year ago - 54 downloads last month - 0 stars on GitHub - 1 maintainer
clcr 1.0.0
Tool fo low coverage region correction1 version - Latest release: almost 2 years ago - 10 downloads last month - 3 stars on GitHub - 1 maintainer
pacbiodataprocessing 1.3.0
Tools to process PacBio sequencing data at molecule level24 versions - Latest release: over 1 year ago - 1 dependent repositories - 135 downloads last month - 0 stars on GitLab.com - 1 maintainer
yapyseq 1.1.0
Yet Another Python Sequencer2 versions - Latest release: almost 5 years ago - 1 dependent repositories - 18 downloads last month - 1 stars on GitHub - 1 maintainer
yanagiba 1.0.0
Filter short or low quality Oxford Nanopore reads which have been basecalled with Albacore.2 versions - Latest release: over 6 years ago - 1 dependent repositories - 17 downloads last month - 1 stars on GitHub - 1 maintainer
vcf-annotation-tools 3.0.0
A tool for annotating VCF files with expression and readcount data15 versions - Latest release: over 5 years ago - 1 dependent repositories - 95 downloads last month - 24 stars on GitHub - 1 maintainer
vatools 5.1.1
A tool for annotating VCF files with expression and readcount data9 versions - Latest release: 4 months ago - 1 dependent repositories - 233 downloads last month - 24 stars on GitHub - 3 maintainers
umitools 0.3.4
A toolset for handling sequencing data with unique molecular identifiers (UMIs)3 versions - Latest release: about 6 years ago - 2 dependent repositories - 40 downloads last month - 12 stars on GitHub - 1 maintainer
strnaming 1.2.0
STRNaming STR Sequence Nomenclature8 versions - Latest release: 5 months ago - 1 dependent package - 1 dependent repositories - 134 downloads last month - 1 stars on GitHub - 1 maintainer
ssub 0.2.1
Polls a GCP Pub/Sub topic for new SampleSheet notification messages in order to initiate bcl2fastq.3 versions - Latest release: about 4 years ago - 1 dependent repositories - 33 downloads last month - 1 maintainer
sruns-monitor 1.2.0
Looks for new Illumina sequencing runs and tars them up into GCP storage19 versions - Latest release: about 4 years ago - 1 dependent repositories - 151 downloads last month - 1 maintainer
snpmatch 4.0.0
A simple python library to identify the most likely strain given the SNPs for a sample14 versions - Latest release: over 4 years ago - 1 dependent repositories - 123 downloads last month - 9 stars on GitHub - 1 maintainer
snoopy 0.4.7
Browser based quality control tool to expedite reviewing predicted variants in next generation se...7 versions - Latest release: over 7 years ago - 3 dependent repositories - 58 downloads last month - 9 stars on GitHub - 1 maintainer
smallrnaseq 0.6.0 💰
Package for short RNA-seq analysis6 versions - Latest release: over 3 years ago - 1 dependent repositories - 34 downloads last month - 29 stars on GitHub - 1 maintainer
seroba 1.0.0
SEROBA: Serotyping for illumina reads3 versions - Latest release: over 6 years ago - 1 dependent repositories - 11 downloads last month - 15 stars on GitHub - 1 maintainer
sequman 0.0.2
functions for routine work with sequence data2 versions - Latest release: over 4 years ago - 1 dependent repositories - 12 downloads last month - 0 stars on GitHub - 1 maintainer
Top 9.3% on pypi.org
2 versions - Latest release: about 5 years ago - 2 dependent repositories - 405 downloads last month - 1 maintainer
sequenza-utils 3.0.0
Analysis of cancer sequencing samples, utilities for the sequenza R package2 versions - Latest release: about 5 years ago - 2 dependent repositories - 405 downloads last month - 1 maintainer
seqpipe 0.0.7
Sequencing pipeline5 versions - Latest release: almost 7 years ago - 1 dependent repositories - 8 downloads last month - 1 stars on GitHub - 1 maintainer
seqm 0.1.0
Utilities for calculating sequence metrics.4 versions - Latest release: about 3 years ago - 1 dependent repositories - 51 downloads last month - 0 stars on GitHub - 1 maintainer
reviewer2 0.9.31
Starts a simple image server that lets you quickly flip through image files from a local director...24 versions - Latest release: almost 3 years ago - 1 dependent repositories - 127 downloads last month - 18 stars on GitHub - 1 maintainer
readfish 2024.2.0
ONT adaptive sampling10 versions - Latest release: 17 days ago - 1 dependent repositories - 285 downloads last month - 161 stars on GitHub - 3 maintainers
pysequen 0.1
Python library for concurrent processing of tasks with dependencies requiring sequencing1 version - Latest release: over 7 years ago - 1 dependent repositories - 12 downloads last month - 3 stars on GitHub - 1 maintainer
pyseq2500 0.64
Control an Illumina HiSeq 2500 System8 versions - Latest release: about 2 years ago - 1 dependent repositories - 56 downloads last month - 18 stars on GitHub - 1 maintainer
pyfq 0.0.6
Fastq manipulations and quality check6 versions - Latest release: over 5 years ago - 1 dependent repositories - 49 downloads last month - 1 maintainer
Top 6.8% on pypi.org
21 versions - Latest release: over 6 years ago - 42 dependent repositories - 646 downloads last month - 68 stars on GitHub - 1 maintainer
pyfastaq 3.17.0
Script to manipulate FASTA and FASTQ files, plus API for developers21 versions - Latest release: over 6 years ago - 42 dependent repositories - 646 downloads last month - 68 stars on GitHub - 1 maintainer
pvacseq-client 0.0.2
Web Front-End for pVAC-Seq3 versions - Latest release: about 7 years ago - 1 dependent package - 1 dependent repositories - 16 downloads last month - 0 stars on GitHub - 3 maintainers
pvacseq 4.0.10
Personalized Variant Antigens by Cancer Sequencing (pVAC-Seq)20 versions - Latest release: over 6 years ago - 2 dependent repositories - 80 downloads last month - 60 stars on GitHub - 2 maintainers
plastid 0.6.1
Tools for analysis of genomics & sequencing data12 versions - Latest release: about 2 years ago - 4 dependent repositories - 96 downloads last month - 35 stars on GitHub - 1 maintainer
picus 0.0.5
Pointed Interpretation of Clinical Variant Significance5 versions - Latest release: over 3 years ago - 1 dependent repositories - 32 downloads last month - 0 stars on GitHub - 1 maintainer
ont-tombo 1.5.1
Analysis of raw nanopore sequencing data.12 versions - Latest release: over 4 years ago - 1 dependent repositories - 145 downloads last month - 220 stars on GitHub - 1 maintainer
omicidx-builder 0.5.1
Tooling to build and deploy omicidx data and resources9 versions - Latest release: almost 4 years ago - 1 dependent repositories - 87 downloads last month - 3 stars on GitHub - 1 maintainer
nucleoatac 0.3.4
python package for calling nucleosomes with ATAC-Seq1 version - Latest release: over 7 years ago - 1 dependent repositories - 18 downloads last month - 98 stars on GitHub - 1 maintainer
ngsphy 1.0.13
phylogenomic simulation of NGS data13 versions - Latest release: over 6 years ago - 1 dependent repositories - 117 downloads last month - 14 stars on GitHub - 1 maintainer
ngcgh 0.4.4
Pseudo-cgh of next-generation sequencing data15 versions - Latest release: over 10 years ago - 1 dependent repositories - 64 downloads last month - 17 stars on GitHub - 1 maintainer
nanosplit 0.1.4
Perform splitting of Oxford Nanopore sequencing data in a fail and pass dataset.5 versions - Latest release: almost 7 years ago - 1 dependent repositories - 22 downloads last month - 1 stars on GitHub - 1 maintainer
nanoplotter 1.10.0
Plotting functions of Oxford Nanopore sequencing data99 versions - Latest release: almost 5 years ago - 1 dependent package - 2 dependent repositories - 273 downloads last month - 2 stars on GitHub - 1 maintainer
Top 8.7% on pypi.org
47 versions - Latest release: about 1 year ago - 1 dependent package - 13 dependent repositories - 871 downloads last month - 9 stars on GitHub - 1 maintainer
nanomath 1.3.0
A few simple math function for other Oxford Nanopore processing scripts47 versions - Latest release: about 1 year ago - 1 dependent package - 13 dependent repositories - 871 downloads last month - 9 stars on GitHub - 1 maintainer
mutwo.ext-core 0.61.1 removed
core library for event based framework mutwo15 versions - Latest release: almost 2 years ago - 2 dependent repositories - 33 downloads last month - 8 stars on GitHub - 1 maintainer
murphy 0.1
Generic tools to identify overlapping genomic regions1 version - Latest release: almost 7 years ago - 1 dependent repositories - 8 downloads last month - 0 stars on GitHub - 1 maintainer
mucor 1.51
Genomic Variant Aggregation and Mutation Correlation2 versions - Latest release: over 8 years ago - 2 dependent repositories - 5 downloads last month - 12 stars on GitHub - 1 maintainer
mirror_seq 0.2.6
The bioinformatics tool for Mirror-seq.8 versions - Latest release: about 8 years ago - 2 dependent repositories - 37 downloads last month - 1 stars on GitHub - 1 maintainer
mbin 1.1.1
mBin: a methylation-based binning framework for metagenomic SMRT sequencing reads3 versions - Latest release: about 6 years ago - 1 dependent repositories - 23 downloads last month - 25 stars on GitHub - 1 maintainer
loopercli 0.12.6
A pipeline submission engine that parses sample inputs and submits pipelines for each sample.8 versions - Latest release: over 4 years ago - 3 dependent repositories - 43 downloads last month - 19 stars on GitHub - 4 maintainers
looper 1.7.0
A pipeline submission engine that parses sample inputs and submits pipelines for each sample.18 versions - Latest release: 4 months ago - 5 dependent repositories - 332 downloads last month - 19 stars on GitHub - 3 maintainers
k-seq 0.4.2a0
Kinetic sequencing analysis by Chen lab at University of California, Santa Barbara3 versions - Latest release: about 4 years ago - 1 dependent repositories - 27 downloads last month - 0 stars on GitHub - 1 maintainer
kman 0.0.1
K-mer management tools1 version - Latest release: about 6 years ago - 1 dependent repositories - 4 downloads last month - 0 stars on GitHub - 1 maintainer
imgtools 0.2.0
Some tools for manipulating image files2 versions - Latest release: over 6 years ago - 1 dependent repositories - 23 downloads last month - 1 stars on GitHub - 1 maintainer
hmobster 0.0.44
VAF clustering for multiple karyotypes40 versions - Latest release: over 1 year ago - 1 dependent repositories - 321 downloads last month - 1 stars on GitHub - 1 maintainer
gpseqc 2.3.6
GPSeq-based centrality estimation.4 versions - Latest release: almost 5 years ago - 1 dependent repositories - 16 downloads last month - 2 stars on GitHub - 1 maintainer
gostrat 0.0.8
Tool to stratify GO terms based on first significant parent8 versions - Latest release: almost 4 years ago - 1 dependent repositories - 64 downloads last month - 1 maintainer
geo-upload-tool 1.0.8
CLI tool for preparing data submission to Gene Expression Omnibus9 versions - Latest release: almost 3 years ago - 1 dependent repositories - 65 downloads last month - 1 maintainer
genetables 0.1.1
Genome table processing4 versions - Latest release: almost 8 years ago - 2 dependent repositories - 18 downloads last month - 1 maintainer
Top 5.1% on pypi.org
19 versions - Latest release: 19 days ago - 4 dependent packages - 10 dependent repositories - 423 downloads last month - 1,315 stars on GitHub - 3 maintainers
galaxy-web-framework 24.0.2
Galaxy web framework19 versions - Latest release: 19 days ago - 4 dependent packages - 10 dependent repositories - 423 downloads last month - 1,315 stars on GitHub - 3 maintainers
galaxy-test-driver 24.0.2
Galaxy test driver18 versions - Latest release: 19 days ago - 1 dependent package - 1 dependent repositories - 185 downloads last month - 1,315 stars on GitHub - 3 maintainers
Top 4.1% on pypi.org
20 versions - Latest release: 19 days ago - 5 dependent packages - 10 dependent repositories - 430 downloads last month - 1,315 stars on GitHub - 3 maintainers
galaxy-job-execution 24.0.2
Galaxy job execution runtime utilities20 versions - Latest release: 19 days ago - 5 dependent packages - 10 dependent repositories - 430 downloads last month - 1,315 stars on GitHub - 3 maintainers
gaet 0.3.0
Evaluate the quality of a genome assembly based on annotated genes1 version - Latest release: about 7 years ago - 1 dependent repositories - 7 downloads last month - 1 stars on GitLab.com - 2 maintainers
fluentdna 2.5.3
Visualization tool for bare fasta files. Supports whole genome alignment and multiple sequence a...3 versions - Latest release: over 4 years ago - 1 dependent repositories - 27 downloads last month - 59 stars on GitHub - 1 maintainer
fings 1.7.1
Filters for Next Generation Sequencing4 versions - Latest release: about 3 years ago - 1 dependent repositories - 46 downloads last month - 8 stars on GitHub - 1 maintainer
filter_variants 0.2.1
Filter variants based on frequencies4 versions - Latest release: over 8 years ago - 2 dependent repositories - 28 downloads last month - 0 stars on GitHub - 1 maintainer
fastqmetrics 0.1.0
Het hoeft voor1 version - Latest release: over 6 years ago - 1 dependent repositories - 10 downloads last month - 0 stars on GitHub - 1 maintainer
Top 8.1% on pypi.org
19 versions - Latest release: 6 months ago - 3 dependent packages - 6 dependent repositories - 13.9 thousand downloads last month - 4 stars on GitHub - 3 maintainers
eido 0.2.2
A project metadata validator19 versions - Latest release: 6 months ago - 3 dependent packages - 6 dependent repositories - 13.9 thousand downloads last month - 4 stars on GitHub - 3 maintainers
diva-seq-opt 0.0.3
Predict the library loading concentration to use for mi-seq runs based on bioanalyzer data.3 versions - Latest release: about 5 years ago - 1 dependent repositories - 17 downloads last month - 1 stars on GitHub - 1 maintainer
de-toolkit 0.9.12
Suite of tools for working with count data29 versions - Latest release: over 4 years ago - 1 dependent repositories - 169 downloads last month - 1 maintainer
deepsvr 0.0.1.post1
Automated Somatic Variant Refinement by Deep Learning1 version - Latest release: about 6 years ago - 1 dependent repositories - 11 downloads last month - 49 stars on GitHub - 1 maintainer
deepacstrain 0.2.1
Predicting pathogenic potentials of novel strains of known bacterial species.3 versions - Latest release: over 3 years ago - 1 dependent repositories - 32 downloads last month - 2 stars on GitLab.com - 1 maintainer
deepacvir 0.2.2
Detecting novel human viruses from DNA reads with reverse-complement neural networks.4 versions - Latest release: over 3 years ago - 1 dependent repositories - 38 downloads last month - 2 stars on GitLab.com - 1 maintainer
deepaclive 0.3.2
Detecting novel pathogens from NGS reads in real-time during a sequencing run.5 versions - Latest release: over 3 years ago - 1 dependent repositories - 47 downloads last month - 1 stars on GitLab.com - 1 maintainer
deepac 0.14.1
Predicting pathogenic potentials of novel DNA with reverse-complement neural networks.19 versions - Latest release: over 1 year ago - 8 dependent repositories - 211 downloads last month - 2 stars on GitLab.com - 1 maintainer
cosmos-wfm 2.13.11
Workflow Management System229 versions - Latest release: over 3 years ago - 4 dependent repositories - 481 downloads last month - 70 stars on GitHub - 1 maintainer
completegenomicstools 0.1.2dev
Tools for manipulating and visualizing data from Complete Genomics3 versions - Latest release: almost 13 years ago - 16 downloads last month - 11 stars on GitHub - 1 maintainer
Top 8.1% on pypi.org
33 versions - Latest release: over 6 years ago - 6 dependent repositories - 145 downloads last month - 212 stars on GitHub - 1 maintainer
circlator 1.5.5
circlator: a tool to circularise genome assemblies33 versions - Latest release: over 6 years ago - 6 dependent repositories - 145 downloads last month - 212 stars on GitHub - 1 maintainer
savemoney 0.2.16
Simple Algorithm for Very Efficient Multiplexing of Oxford Nanopore Experiments for You!13 versions - Latest release: 2 months ago - 194 downloads last month - 9 stars on GitHub - 1 maintainer
cemba-data 1.6.9
Pipelines for single nucleus methylome and multi-omic dataset.55 versions - Latest release: about 1 year ago - 1 dependent repositories - 151 downloads last month - 14 stars on GitHub - 1 maintainer
bioutil 0.4.0
Bioinfomatics File access tools5 versions - Latest release: over 5 years ago - 43 downloads last month - 1 stars on GitHub - 1 maintainer
bioa 1.24
Library for viral diversity estimation and identification using next-gen sequencing data.2 versions - Latest release: almost 11 years ago - 2 dependent repositories - 38 downloads last month - 1 maintainer
barcode-splitter 0.18.6
A utility to split multiple sequence files using multiple sets of barcodes7 versions - Latest release: almost 5 years ago - 70 downloads last month - 2 maintainers
varvamp 1.2.0
Variable VirusAMPlicons (varVAMP) is a tool to design primers for highly diverse viruses22 versions - Latest release: 19 days ago - 334 downloads last month - 19 stars on GitHub - 1 maintainer
flipbook 1.0.1
Starts a simple image server that lets you quickly flip through image files from a local director...19 versions - Latest release: 5 months ago - 1 dependent repositories - 205 downloads last month - 18 stars on GitHub - 1 maintainer
bookend-rna 1.2.1
End-guided transcript assembler for short and long RNA-seq reads.17 versions - Latest release: 8 months ago - 1 dependent repositories - 59 downloads last month - 13 stars on GitHub - 1 maintainer
galaxy-test-api 24.0.2
Galaxy API tests18 versions - Latest release: 19 days ago - 1 dependent repositories - 186 downloads last month - 1,315 stars on GitHub - 3 maintainers
galaxy-selenium 24.0.2
Galaxy Selenium interaction framework19 versions - Latest release: 19 days ago - 1 dependent repositories - 222 downloads last month - 1,315 stars on GitHub - 3 maintainers
Top 3.6% on pypi.org
25 versions - Latest release: 19 days ago - 5 dependent packages - 13 dependent repositories - 824 downloads last month - 1,315 stars on GitHub - 3 maintainers
galaxy-objectstore 24.0.2
Galaxy objectstore framework and plugins25 versions - Latest release: 19 days ago - 5 dependent packages - 13 dependent repositories - 824 downloads last month - 1,315 stars on GitHub - 3 maintainers
Top 3.8% on pypi.org
22 versions - Latest release: 19 days ago - 3 dependent packages - 10 dependent repositories - 665 downloads last month - 1,315 stars on GitHub - 3 maintainers
galaxy-job-metrics 24.0.2
Galaxy job metrics22 versions - Latest release: 19 days ago - 3 dependent packages - 10 dependent repositories - 665 downloads last month - 1,315 stars on GitHub - 3 maintainers
Top 5.2% on pypi.org
19 versions - Latest release: 19 days ago - 2 dependent packages - 10 dependent repositories - 396 downloads last month - 1,315 stars on GitHub - 3 maintainers
galaxy-auth 24.0.2
Galaxy auth framework and implementations19 versions - Latest release: 19 days ago - 2 dependent packages - 10 dependent repositories - 396 downloads last month - 1,315 stars on GitHub - 3 maintainers
Top 6.1% on pypi.org
18 versions - Latest release: 19 days ago - 2 dependent packages - 9 dependent repositories - 272 downloads last month - 1,315 stars on GitHub - 3 maintainers
galaxy-test-base 24.0.2
Galaxy testing utilities18 versions - Latest release: 19 days ago - 2 dependent packages - 9 dependent repositories - 272 downloads last month - 1,315 stars on GitHub - 3 maintainers
Top 4.4% on pypi.org
19 versions - Latest release: 19 days ago - 4 dependent packages - 13 dependent repositories - 450 downloads last month - 1,315 stars on GitHub - 3 maintainers
galaxy-app 24.0.2
Galaxy application (backend)19 versions - Latest release: 19 days ago - 4 dependent packages - 13 dependent repositories - 450 downloads last month - 1,315 stars on GitHub - 3 maintainers
Top 3.5% on pypi.org
25 versions - Latest release: over 2 years ago - 1 dependent package - 10 dependent repositories - 5.97 thousand downloads last month - 67 stars on GitHub - 4 maintainers
refgenie 0.12.1
Refgenie creates a standardized folder structure for reference genome files and indexes. You can ...25 versions - Latest release: over 2 years ago - 1 dependent package - 10 dependent repositories - 5.97 thousand downloads last month - 67 stars on GitHub - 4 maintainers
Top 2.2% on pypi.org
27 versions - Latest release: over 2 years ago - 2 dependent packages - 40 dependent repositories - 33 thousand downloads last month - 3 stars on GitHub - 4 maintainers
refgenconf 0.12.2
A standardized configuration object for reference genome assemblies27 versions - Latest release: over 2 years ago - 2 dependent packages - 40 dependent repositories - 33 thousand downloads last month - 3 stars on GitHub - 4 maintainers
Top 5.5% on pypi.org
25 versions - Latest release: over 1 year ago - 1 dependent package - 7 dependent repositories - 689 downloads last month - 5 maintainers
changeo 1.3.0
A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.25 versions - Latest release: over 1 year ago - 1 dependent package - 7 dependent repositories - 689 downloads last month - 5 maintainers
chanjo-ccds 0.1
CCDS to Chanjo BED converter4 versions - Latest release: 9 months ago - 2 dependent repositories - 23 downloads last month - 1 maintainer
wormbase-parasite 0.5.0
An interface to the Wormbase REST API3 versions - Latest release: over 3 years ago - 1 dependent repositories - 46 downloads last month - 3 stars on GitHub - 1 maintainer
simulatesv 0.2.0
Simulate structural variations and SNPs with artificial dna sequences4 versions - Latest release: almost 7 years ago - 1 dependent repositories - 12 downloads last month - 1 stars on GitHub - 1 maintainer
ngstk 0.0.1rc2
Next-generation sequencing utility functions3 versions - Latest release: about 5 years ago - 1 dependent repositories - 29 downloads last month - 1 stars on GitHub - 4 maintainers
fdstools 2.0.4
Forensic DNA Sequencing Tools13 versions - Latest release: about 1 year ago - 2 dependent repositories - 363 downloads last month - 5 stars on GitHub - 1 maintainer
ediacara 0.2.2
EGF's alignment reporter2 versions - Latest release: 9 months ago - 16 downloads last month - 1 maintainer
Related Keywords
bioinformatics
112
genomics
64
ngs
53
workflow
39
pipeline
35
dna
33
science
30
hacktoberfest
28
usegalaxy
26
workflow-engine
26
biology
25
Galaxy
21
NGS
20
nanopore
19
python
12
DNA
12
variant
11
project
10
quality
9
next generation sequencing
9
genome
8
control
8
cancer
8
metadata
8
next-generation-sequencing
7
variants
7
rna-seq
7
plotting
7
bioinformatics-pipeline
7
quality control
7
pathogen
6
genome-analysis
6
learning
6
infectious-diseases
6
research
6
global-health
6
analysis
6
deep
6
processing
6
RNA-seq
5
variant-analysis
5
variation
5
prediction
5
genetics
5
galaxy
5
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5
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5
adaptive immunity
4
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4
rna
4
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4
synthetic
4
quality-control
4
illumina
4
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sequence
4
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4
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3
metagenomics
3
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3
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3
alignment
3
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3
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3
notation
3
generative-art
3
csound
3
creative-coding
3
methylation
3
VAF
3
high-throughput
3
expression
3
coverage
3
assembly
3
pipeline-submission-engine
3
immunology
3
AIRR-seq
3
bioconda
3
data-visualization
3
multiqc
3
oxford-nanopore
3
pypi
3
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3
python3
3
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3
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3
bisulfite
2
nucleotide
2
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2
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2