bioconductor.org "differential-expression" keyword
vidger 1.32.0
Create rapid visualizations of RNAseq data in R7 versions - Latest release: about 2 months ago - 36.6 thousand downloads total - 21 stars on GitHub - 1 maintainer
scLANE 1.2.0
Model Gene Expression Dynamics with Spline-Based NB GLMs, GEEs, & GLMMs4 versions - Latest release: 5 months ago - 5.49 thousand downloads total - 17 stars on GitHub - 1 maintainer
Top 5.2% on bioconductor.org
11 versions - Latest release: 5 months ago - 1 dependent package - 103 thousand downloads total - 30 stars on GitHub - 1 maintainer
DEGreport 1.48.0
Report of DEG analysis11 versions - Latest release: 5 months ago - 1 dependent package - 103 thousand downloads total - 30 stars on GitHub - 1 maintainer
limpa 1.4.0
Quantification and Differential Analysis of Proteomics Data8 versions - Latest release: 5 months ago - 12 thousand downloads total - 24 stars on GitHub - 1 maintainer
NBAMSeq 1.28.0
Negative Binomial Additive Model for RNA-Seq Data7 versions - Latest release: 5 months ago - 18.1 thousand downloads total - 2 stars on GitHub - 1 maintainer
epidecodeR 1.20.0
epidecodeR: a functional exploration tool for epigenetic and epitranscriptomic regulation7 versions - Latest release: 5 months ago - 14.3 thousand downloads total - 5 stars on GitHub - 1 maintainer
tidybulk 2.2.0
Brings transcriptomics to the tidyverse9 versions - Latest release: 5 months ago - 1 dependent package - 32.7 thousand downloads total - 182 stars on GitHub - 1 maintainer
ideal 2.6.0
Interactive Differential Expression AnaLysis7 versions - Latest release: 5 months ago - 37.1 thousand downloads total - 34 stars on GitHub - 1 maintainer
Top 3.5% on bioconductor.org
8 versions - Latest release: 3 months ago - 1 dependent package - 203 thousand downloads total - 36 stars on GitHub - 1 maintainer
Glimma 2.22.1
Interactive visualizations for gene expression analysis8 versions - Latest release: 3 months ago - 1 dependent package - 203 thousand downloads total - 36 stars on GitHub - 1 maintainer
deco 1.18.0 removed
Decomposing Heterogeneous Cohorts using Omic Data Profiling2 versions - Latest release: almost 3 years ago - 4.59 thousand downloads total - 4 stars on GitHub - 1 maintainer
Related Keywords
DifferentialExpression
10
GeneExpression
10
Software
10
RNASeq
8
Sequencing
6
Visualization
5
r
5
Transcriptomics
4
Clustering
3
ReportWriting
3
Transcription
3
bioconductor
3
ImmunoOncology
3
Bayesian
2
gene-expression
2
rna-seq
2
transcriptomics
2
GeneSetEnrichment
2
rna-seq-analysis
2
genomics
2
Microarray
2
QualityControl
2
Proteomics
2
Regression
2
epigenetics
1
epitranscriptomics
1
SystemsBiology
1
HistoneModification
1
GeneRegulation
1
FunctionalPrediction
1
FunctionalGenomics
1
Epitranscriptomics
1
Epigenetics
1
ChipOnChip
1
interactive-visualizations
1
trajectory-inference
1
single-cell
1
scrna-seq
1
splines
1
negative-binomial-regression
1
generalized-linear-models
1
generalized-additive-models
1
Coverage
1
smallrna
1
report
1
qc
1
stratification
1
sampling-methods
1
patients-stratification
1
omics
1
omic-data-profiling
1
heterogeneous-populations
1
heterogeneity
1
deco
1
bioinformatics
1
mRNAMicroarray
1
MultipleComparison
1
MicroRNAArray
1
FeatureExtraction
1
ExonArray
1
BiomedicalInformatics
1
genomics-visualization
1
transcripts
1
tidyverse
1
tidy-data
1
tidy
1
tibble
1
redundancy
1
pipe
1
pca
1
mds-dimensions
1
gsea
1
gene-symbols
1
entrez
1
ensembl-ids
1
edger
1
deseq2
1
bulk-transcriptional-analyses
1
Normalization
1
Infrastructure
1
AssayDomain
1
rna-velocity
1
pseudotime
1
mixed-models
1
estimating-equations
1
TimeCourse
1
SingleCell
1
user-friendly
1
shiny
1
reproducible-research
1
ShinyApps
1
GUI
1
visualization
1
data-munging
1
mass-spectrometry
1
Preprocessing
1
MassSpectrometry
1
DataImport
1
BiologicalQuestion
1
tsne
1